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Payroll Basics: Gross to Net

Payroll turns an employee's agreed pay rate into an actual paycheck, after subtracting taxes and other withholdings — and it involves an entirely separate set of employer costs on top of that. It is one of the most error-sensitive, tightly regulated areas of bookkeeping, because mistakes affect real people's paychecks and can trigger penalties. This lesson walks through the full gross-to-net calculation and the resulting journal entries with realistic numbers.

Why this skill matters professionally

Payroll errors are highly visible — an employee who's shorted on a paycheck will notice immediately, and repeated mistakes damage trust fast. Employers specifically seek bookkeepers who can run payroll accurately and understand the difference between what's withheld from the employee and what the employer separately owes. Beyond accuracy, payroll compliance carries real financial risk: missed or late tax deposits can trigger penalties from tax authorities, and misclassifying employees as contractors is one of the most common and costly payroll mistakes small businesses make.

Learning objectives

  • Compute gross pay for salaried and hourly employees.
  • List the standard withholdings and employer taxes.

Background concepts

Gross pay vs. net pay

Gross pay is the full amount earned before any deductions. Net pay ('take-home pay') is what actually lands in the employee's account after all withholdings. Everything in between is either withheld from the employee or paid separately by the employer.

Employee withholdings (deducted from gross pay)

These reduce the employee's paycheck but are not an added cost to the employer — the employer is simply collecting and forwarding money the employee already earned.

  • Federal income tax — based on the employee's W-4 elections and IRS withholding tables (U.S. example; rules vary by country).
  • State/local income tax — varies by jurisdiction, and some jurisdictions have none.
  • Social Security — 6.2% of wages up to an annual wage base cap (U.S. figure, adjusted periodically).
  • Medicare — 1.45% of all wages, with an additional 0.9% surtax on high earners in the U.S.
  • Voluntary deductions — health insurance, 401(k)/retirement contributions, garnishments.

Employer payroll taxes (an added employer cost)

These come out of the employer's pocket, on top of gross wages — they are never deducted from the employee's check.

  • Employer Social Security match — 6.2% of wages, mirroring the employee's share.
  • Employer Medicare match — 1.45% of wages, mirroring the employee's share.
  • FUTA (federal unemployment) and SUTA (state unemployment) — employer-paid, rates vary significantly by state and claims history.

Why this all matters for the books

The employee's gross wages become an expense (Wages Expense). Withholdings become liabilities until they're remitted to the taxing authority or benefit provider. Employer taxes are a separate, additional expense — total payroll cost to the company is always higher than the sum of employees' gross wages.

Step-by-step

1. 1. Calculate gross pay

Salaried employees: annual salary divided by the number of pay periods. Hourly employees: hours worked times the hourly rate, with overtime (typically 1.5x) for hours over 40 in a week under U.S. federal rules — overtime rules vary elsewhere.

Salaried, biweekly (26 pay periods/year), $62,400/year:
  $62,400 / 26 = $2,400.00 gross per period

Hourly, weekly, $22/hour, 46 hours worked:
  40 hrs x $22.00       = $880.00
  6 hrs x $33.00 (OT)    = $198.00
  Gross pay              = $1,078.00

2. 2. Apply employee tax withholdings

Using the hourly employee's $1,078.00 gross as an example, with a simplified flat 12% federal rate and 4% state rate for illustration (real withholding tables are more granular and depend on W-4 elections and filing status).

Gross pay                          $1,078.00
Federal income tax (12%, illus.)     (129.36)
State income tax (4%, illus.)         (43.12)
Social Security (6.2%)                (66.84)
Medicare (1.45%)                      (15.63)
Health insurance (fixed)              (60.00)
401(k) contribution (5%)              (53.90)
Total withholdings                   (368.85)
Net pay                              $709.15

3. 3. Calculate employer payroll taxes

Separately from the paycheck, the employer owes matching Social Security and Medicare, plus unemployment taxes.

Employer Social Security (6.2%)       $66.84
Employer Medicare (1.45%)              $15.63
FUTA (0.6% up to wage base, illus.)     $6.47
SUTA (2.7% up to wage base, illus.)    $29.11
Total employer taxes                  $118.05

4. 4. Record the payroll journal entry

The gross wage is the expense; each withholding is a liability until paid; net pay is the cash that actually goes out.

Dr Wages Expense                1,078.00
    Cr Federal Income Tax Payable          129.36
    Cr State Income Tax Payable             43.12
    Cr Social Security Payable              66.84
    Cr Medicare Payable                     15.63
    Cr Health Insurance Payable             60.00
    Cr 401(k) Payable                       53.90
    Cr Cash (net pay)                      709.15

5. 5. Record the employer tax journal entry

This is a separate entry — it's additional expense to the company, not a deduction from the employee.

Dr Payroll Tax Expense             118.05
    Cr Social Security Payable              66.84
    Cr Medicare Payable                     15.63
    Cr FUTA Payable                          6.47
    Cr SUTA Payable                         29.11

6. 6. Remit withholdings and taxes on schedule

Federal and state tax deposits are typically due on a schedule based on the size of the payroll (semiweekly, monthly, or quarterly in the U.S.), and unemployment taxes are typically remitted quarterly. When paid, the liability accounts are cleared against cash.

Remitting the combined Social Security + Medicare liability of $198.75 (both employee and employer shares, 6.2%+6.2%+1.45%+1.45%):
Dr Social Security Payable    133.68
Dr Medicare Payable            31.26
    Cr Cash                          164.94
(Note: figures illustrate the combined employee+employer remittance for this single paycheck example.)

7. 7. Reconcile payroll liability accounts

At month-end, each payroll liability account balance should equal exactly what's owed and not yet remitted — a lingering balance after a scheduled remittance date is a red flag worth investigating immediately.

8. 8. File required payroll tax returns

In the U.S., this includes quarterly Form 941 (federal payroll taxes) and annual Form 940 (FUTA), plus state equivalents, along with year-end W-2s for employees. Requirements and forms vary significantly by country and jurisdiction.

Real-world workplace examples

A salaried employee's biweekly paycheck

A marketing coordinator earning $58,000/year is paid biweekly: $58,000 / 26 = $2,230.77 gross per period, before any withholdings are applied the same way as the hourly example.

Overtime miscalculated

An employee working 45 hours in a week should get 40 regular hours plus 5 hours at 1.5x. A payroll clerk who pays all 45 hours at straight time underpays the employee and violates wage-and-hour law in most U.S. jurisdictions.

Missed 401(k) match

A company offers a 4% 401(k) match but a new payroll clerk forgets to set it up for a new hire's first three pay periods — the employer match is a real, separate cost that needs correcting retroactively once caught.

Contractor vs. employee misclassification

A business pays a worker who works set hours at company-directed tasks as a 1099 contractor to avoid payroll taxes. If reclassified as an employee upon review, the company can owe back payroll taxes plus penalties — classification rules vary by jurisdiction but are strictly enforced.

Garnishment withheld correctly

An employee has a court-ordered wage garnishment of $150/pay period. This is withheld like any other deduction and remitted directly to the court or agency specified in the order, not held by the company.

Practical scenarios

Case: running payroll for a 3-person shop

Maple Street Bakery has one salaried manager ($48,000/year, biweekly) and two hourly bakers ($18/hour). In a week both bakers work 42 hours. Manager: $48,000 / 26 = $1,846.15 gross per biweekly period. Baker A: 40 x $18 = $720 + 2 x $27 (OT) = $54 → $774.00 gross. Baker B: same = $774.00 gross. Total gross wages for the pay period (assuming biweekly bakers too, two weeks each): each baker's biweekly gross would combine two such weeks; for this single-week illustration, weekly payroll gross totals $1,846.15/2 (if converted to weekly) is unnecessary — the lesson: always match the pay frequency consistently across employees when totaling payroll expense, since mixing weekly and biweekly figures without conversion is a common error that throws off total payroll expense reports.

Case: catching a withholding table error

After a state tax rate change takes effect, a company keeps using the old withholding percentage for six pay periods before an employee flags a discrepancy on their pay stub compared to a coworker at a different employer. The bookkeeper recalculates the affected periods, adjusts the next paycheck's withholding to true up the difference, and updates the payroll software's tax tables — a reminder that payroll tax tables need active maintenance, not one-time setup.

Common mistakes beginners make

Confusing employee withholdings with employer taxes

Employee withholdings come out of the paycheck; employer taxes are an additional company expense. Booking Social Security only once, instead of both the employee and employer shares, understates true payroll cost.

Ignoring overtime rules

Paying straight time for hours over 40/week (in jurisdictions requiring 1.5x overtime) is a wage-and-hour violation with real legal exposure, not just an accounting error.

Misclassifying workers

Calling someone a contractor to avoid payroll taxes, when they function like an employee (set hours, company equipment, ongoing relationship), risks significant back taxes and penalties if reclassified.

Missing tax deposit deadlines

Payroll tax deposits often run on strict, frequent schedules; late deposits typically trigger escalating penalties even if the amount is eventually paid in full.

Not reconciling payroll liability accounts

If withholding liability accounts aren't cleared to zero after remittance, there's likely an unremitted balance, a calculation error, or a duplicate entry hiding in the books.

Best practices

  • Keep W-4 (or local equivalent) elections current and re-verify at least annually.
  • Recalculate overtime correctly every time hours exceed the legal threshold.
  • Separate employee withholding entries from employer tax entries in every payroll run.
  • Reconcile every payroll liability account after each remittance.
  • Double-check worker classification (employee vs. contractor) against current legal tests, not convenience.
  • Automate tax table updates or verify them each time rates change.
  • File required payroll tax returns and W-2/1099 forms on schedule.
  • Keep payroll records for the full retention period required in your jurisdiction.

Professional tips

  • Run a 'payroll cost per employee' report periodically — most owners are surprised how much higher it is than gross wages alone once employer taxes and benefits are included.
  • Set calendar reminders for tax deposit and filing deadlines well before they're due, not on the due date.
  • When in doubt about worker classification, err toward employee status or get a professional opinion — the penalties for misclassification usually far exceed the tax savings.
  • Use payroll software with built-in compliance updates rather than manually tracking changing tax tables.
  • Keep a payroll change log (raises, new hires, benefit elections) so every paycheck ties to a documented change.
  • Review the first paycheck for every new hire personally — most payroll setup errors surface immediately.

Practice exercises

Calculate gross pay with overtime

An employee earns $19/hour and works 48 hours in a week. Calculate gross pay assuming 1.5x overtime over 40 hours.

Answer: 40 x 19 = 760; 8 x 28.50 = 228; Gross = $988.00

Full gross-to-net calculation

Using $988.00 gross pay, calculate net pay assuming: federal tax 11%, state tax 3%, Social Security 6.2%, Medicare 1.45%, and a $40 health insurance deduction.

Answer: Fed 108.68, State 29.64, SS 61.26, Medicare 14.33, Health 40.00. Total withholdings 253.91. Net pay = $734.09.

Journal entries for a full payroll run

Using the numbers above, write the payroll journal entry and a separate employer payroll tax entry, assuming FUTA of $5.93 and SUTA of $26.68.

Review questions

What's the difference between gross pay and net pay?

Gross pay is total earnings before deductions; net pay is what actually lands in the employee's account after all withholdings.

Why are employer payroll taxes recorded in a separate journal entry from the employee's paycheck?

Because they're an additional company expense, not a deduction from the employee's wages — mixing them understates or misstates both figures.

Name three employee withholdings and one employer-only tax.

Federal income tax, Social Security, and Medicare are withheld from employees; FUTA (or SUTA) is paid entirely by the employer.

Why is worker misclassification risky?

Treating an employee as a contractor to avoid payroll taxes can trigger significant back taxes and penalties if the classification is challenged and overturned.

What should you check if a payroll liability account doesn't zero out after remittance?

Look for a calculation error, a missed remittance, or a duplicate/omitted entry — the balance should reflect exactly what's currently owed and unpaid.

Key takeaways

  • Gross pay minus employee withholdings equals net pay.
  • Employer payroll taxes are a separate, additional expense on top of gross wages.
  • Overtime calculations must follow applicable wage-and-hour rules precisely.
  • Worker classification (employee vs. contractor) carries real legal and financial risk if done wrong.
  • Payroll liability accounts should be reconciled to zero after each remittance.
  • Tax rates, wage bases, and filing rules vary by jurisdiction and change over time — verify current rates rather than assuming.
  • Total payroll cost to a company is always higher than the sum of employee gross wages.

Frequently asked questions

Do all employers pay the exact same payroll tax rates?

No — rates like SUTA vary by state and by employer claims history, and Social Security/Medicare rates and wage bases can change; always verify current figures.

What happens if I withhold too little from an employee's paycheck?

The shortfall typically needs correcting in a subsequent paycheck, and repeated errors can create issues at year-end tax filing for the employee.

Is overtime always calculated at 1.5x?

In the U.S. it's the federal standard over 40 hours/week, but some states and situations use different multipliers or thresholds — verify local rules.

Can a salaried employee ever be owed overtime?

Yes, if they're classified as non-exempt under wage-and-hour law rather than exempt — salary alone doesn't automatically exempt someone from overtime rules.

What records should be kept for payroll?

Timesheets, pay stubs, tax filings, and W-4/withholding forms, generally retained for several years per jurisdiction requirements.

How often are payroll tax deposits due?

It depends on the size of the payroll and jurisdiction — could be semiweekly, monthly, or quarterly; check current rules rather than assuming a fixed schedule.

Lesson complete

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